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A Catalog of Reference Genomes from the Human Microbiome

Karen E. Nelson,George M. Weinstock,Sarah K. Highlander,Kim C. Worley,Heather H. Creasy,Jennifer Wortman,Douglas B. Rusch,Makedonka Mitreva,Erica Sodergren,Asif T. Chinwalla,Michael Feldgarden,Dirk Gevers,Brian J. Haas,Ramana Madupu,Doyle V. Ward,Bruce W. Birren,Richard A. Gibbs,Barbara A. Methé,Joseph F. Petrosino,Robert L. Strausberg,Granger Sutton,Owen White,Richard K. Wilson,Scott Durkin,Michelle Giglio,Sharvari Gujja,Clint Howarth,Chinnappa D. Kodira,Nikos C. Kyrpides,Teena Mehta,Donna M. Muzny,M.A. Pearson,Kymberlie H. Pepin,Amrita Pati,Xiang Qin,Chandri Yandava,Qiandong Zeng,Lan Zhang,Aaron M. Berlin,Lei Chen,Theresa A. Hepburn,Justin Johnson,Jamison McCorrison,Jason R. Miller,Pat Minx,Chad Nusbaum,Carsten Russ,Sean M. Sykes,Chad Tomlinson,Sarah Young,Wesley C. Warren,Jonathan H. Badger,Jonathan Crabtree,Victor Markowitz,Joshua Orvis,Andrew Cree,Steve Ferriera,Lucinda L. Fulton,Robert S. Fulton,Marcus Gillis,Lisa Hemphill,Vandita Joshi,Christie Kovar,Manolito Torralba,Kris A. Wetterstrand,Amr Abouellleil,Aye Wollam,Christian Buhay,Yan Ding,Shannon Dugan,Michael G. FitzGerald,Mike Holder,Jessica B. Hostetler,Sandra W. Clifton,Emma Allen‐Vercoe,Ashlee M. Earl,Candace N. Farmer,Konstantinos Liolios,Michael G. Surette,Qingyu Xu,Craig Pohl,Katarzyna Wilczek-Boney,Dianhui Zhu

Microbiome

Genome

Biology

2010

News from the Inner Tube of Life A major initiative by the U.S. National Institutes of Health to sequence 900 genomes of microorganisms that live on the surfaces and orifices of the human body has established standardized protocols and methods for such large-scale reference sequencing. By combining previously accumulated data with new data, Nelson et al. (p. 994 ) present an initial analysis of 178 bacterial genomes. The sampling so far barely scratches the surface of the microbial diversity found on humans, but the work provides an important baseline for future analyses.

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“A Catalog of Reference Genomes from the Human Microbiome” is a paper by Karen E. Nelson George M. Weinstock Sarah K. Highlander Kim C. Worley Heather H. Creasy Jennifer Wortman Douglas B. Rusch Makedonka Mitreva Erica Sodergren Asif T. Chinwalla Michael Feldgarden Dirk Gevers Brian J. Haas Ramana Madupu Doyle V. Ward Bruce W. Birren Richard A. Gibbs Barbara A. Methé Joseph F. Petrosino Robert L. Strausberg Granger Sutton Owen White Richard K. Wilson Scott Durkin Michelle Giglio Sharvari Gujja Clint Howarth Chinnappa D. Kodira Nikos C. Kyrpides Teena Mehta Donna M. Muzny M.A. Pearson Kymberlie H. Pepin Amrita Pati Xiang Qin Chandri Yandava Qiandong Zeng Lan Zhang Aaron M. Berlin Lei Chen Theresa A. Hepburn Justin Johnson Jamison McCorrison Jason R. Miller Pat Minx Chad Nusbaum Carsten Russ Sean M. Sykes Chad Tomlinson Sarah Young Wesley C. Warren Jonathan H. Badger Jonathan Crabtree Victor Markowitz Joshua Orvis Andrew Cree Steve Ferriera Lucinda L. Fulton Robert S. Fulton Marcus Gillis Lisa Hemphill Vandita Joshi Christie Kovar Manolito Torralba Kris A. Wetterstrand Amr Abouellleil Aye Wollam Christian Buhay Yan Ding Shannon Dugan Michael G. FitzGerald Mike Holder Jessica B. Hostetler Sandra W. Clifton Emma Allen‐Vercoe Ashlee M. Earl Candace N. Farmer Konstantinos Liolios Michael G. Surette Qingyu Xu Craig Pohl Katarzyna Wilczek-Boney Dianhui Zhu published in 2010. It has an Open Access status of “green”. You can read and download a PDF Full Text of this paper here.