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DOI: 10.1073/pnas.1217767110
¤ OpenAccess: Bronze
This work has “Bronze” OA status. This means it is free to read on the publisher landing page, but without any identifiable license.

Evidence for a persistent microbial seed bank throughout the global ocean

Sean Gibbons,J. Gregory Caporaso,Meg Pirrung,Dawn Field,Rob Knight,Jack A. Gilbert

Biome
Phylogenetic diversity
Phylogenetic tree
2013
Do bacterial taxa demonstrate clear endemism, like macroorganisms, or can one site's bacterial community recapture the total phylogenetic diversity of the world's oceans? Here we compare a deep bacterial community characterization from one site in the English Channel (L4-DeepSeq) with 356 datasets from the International Census of Marine Microbes (ICoMM) taken from around the globe (ranging from marine pelagic and sediment samples to sponge-associated environments). At the L4-DeepSeq site, increasing sequencing depth uncovers greater phylogenetic overlap with the global ICoMM data. This site contained 31.7-66.2% of operational taxonomic units identified in a given ICoMM biome. Extrapolation of this overlap suggests that 1.93 × 10(11) sequences from the L4 site would capture all ICoMM bacterial phylogenetic diversity. Current technology trends suggest this limit may be attainable within 3 y. These results strongly suggest the marine biosphere maintains a previously undetected, persistent microbial seed bank.
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    Evidence for a persistent microbial seed bank throughout the global ocean” is a paper by Sean Gibbons J. Gregory Caporaso Meg Pirrung Dawn Field Rob Knight Jack A. Gilbert published in 2013. It has an Open Access status of “bronze”. You can read and download a PDF Full Text of this paper here.