DOI: 10.1016/s0140-6736(21)02724-0
Global burden of bacterial antimicrobial resistance in 2019: a systematic analysis
Christopher J L Murray, Kevin S Ikuta, Fablina Sharara, Lucien Swetschinski, Gisela Robles Aguilar, Authia Gray, Chieh Han, Catherine Bisignano, Puja C Rao, Eve E. Wool, Sarah Charlotte Johnson, Annie J Browne, Michael Give Chipeta, Frederick Fell, Sean Hackett, Georgina Haines-Woodhouse, Bahar H Kashef Hamadani, Emmanuelle A P Kumaran, Barney McManigal, Ramesh Agarwal, Samuel Akech, Samuel B. Albertson, John Amuasi, Jason Andrews, Aleksandr Y. Aravkin, David A. B. Dance, Freddie Bailey, Stephen Baker, Buddha Basnyat, Adrie Bekker, Rose G Bender, Adhisivam Bethou, Julia Bielicki, Suppawat Boonkasidecha, James Bukosia, Cristina Carvalheiro, Carlos A Castañeda-Orjuela, Vilada Chansamouth, Suman Chaurasia, Sara Chiurchiù, Fazle Chowdhury, Aislinn J Cook, Ben Cooper, Tim R Cressey, Elia Criollo-Mora, Matthew Cunningham, Saffiatou Darboe, Nicholas P. J. Day, Maia De Luca, Klara Dokova, Angela Dramowski, Susanna Dunachie, Tim Eckmanns, Daniel Eibach, Amir Emami, Nicholas A. Feasey, Natasha Fisher-Pearson, Karen Forrest, Denise Garrett, Petra Gastmeier, Ababi Zergaw Giref, Rachel Claire Greer, Vipin Gupta, Sebastian Haller, Andrea Haselbeck, Simon I. Hay, Marianne Holm, Susan Hopkins, Kenneth C Iregbu, Jan Jacobs, Daniel Jarovsky, Fatemeh Javanmardi, Meera Khorana, Niranjan Kissoon, Elsa Kobeissi, Tomislav Kostyanev, Fiorella Krapp, Ralf Krumkamp, Ajay Kumar, Hmwe H Kyu, Cherry Lim, Direk Limmathurotsakul, Michael James Loftus, Miles Lunn, Jianing Ma, Neema Mturi, Tatiana Munera-Huertas, Patrick Musicha, Marisa Marcia Mussi-Pinhata, Tomoka Nakamura, Ruchi Nanavati, Sushma Nangia, Paul N. Newton, Chanpheaktra Ngoun, Amanda Novotney, Davis Nwakanma, Christina W Obiero, Antonio Olivas-Martinez, Piero Olliaro, Ednah Ooko
Medicine
Antibiotic resistance
Infectious disease (medical specialty)
DOI: 10.1021/acs.est.1c06531
Practical Indicators for Risk of Airborne Transmission in Shared Indoor Environments and Their Application to COVID-19 Outbreaks
Zhike Peng, A L Pineda Rojas, Emilio Kropff, William P. Bahnfleth, Giorgio Buonanno, Stephanie J. Dancer, Jarek Kurnitski, Y. Li, M. Loomans, Linsey C. Marr, Lidia Morawska, William W. Nazaroff, Catherine J. Noakes, Xavier Querol, Chandra Sekhar, Raymond Tellier, Trisha Greenhalgh, Lydia Bourouiba, AC Atze Boerstra, Jian Tang, Stephan Miller, Jose L. Jimenez
Outbreak
Airborne transmission
Transmission (telecommunications)
DOI: 10.1038/s41590-021-01121-x
The immunoregulatory landscape of human tuberculosis granulomas
Erin McCaffrey, Michele Donato, Leeat Keren, Zhenghao Chen, Alea Delmastro, Megan B. Fitzpatrick, Sanjana Gupta, Noah F. Greenwald, Alex Baranski, William Graf, Rashmi Kumar, Marc Bosse, Christine Camacho Fullaway, Pratista K. Ramdial, Erna Forgó, Vladimir Jojic, David Van Valen, Smriti Mehra, Shabaana A. Khader, Sean C. Bendall, Matt van de Rijn, Daniel Kalman, Deepak Kaushal, Robert L. Hunter, Niaz Banaei, Adrie J. C. Steyn, Rhiju Das, Michael Angelo
Granuloma
Tuberculosis
Immune system
DOI: 10.1056/nejmoa2104535
Shorter Treatment for Nonsevere Tuberculosis in African and Indian Children
Anna Turkova, Genevieve H. Wills, Eric Wobudeya, Chishala Chabala, Megan Palmer, Aarti Kinikar, Syed Hissar, Louise Choo, Philippa Musoke, Veronica Mulenga, Vidya Mave, Bency Joseph, Kristen LeBeau, Margaret J. Thomason, Robert B. Mboizi, Monica Kapasa, Marieke M. van der Zalm, Priyanka Raichur, Perumal K. Bhavani, Helen McIlleron, Anne-Marie Demers, Rob Aarnoutse, James Love-Koh, James A. Seddon, Steven B. Welch, Stephen M. Graham, Anneke C. Hesseling, Diana M. Gibb, Angela M. Crook
Medicine
Regimen
Tuberculosis
DOI: 10.1016/s2213-2600(22)00092-3
The intersecting pandemics of tuberculosis and COVID-19: population-level and patient-level impact, clinical presentation, and corrective interventions
Keertan Dheda, Tahlia Perumal, Harry Moultrie, Rubeshan Perumal, Aliasgar Esmail, Alex J Scott, Zarir Udwadia, Kwok Chiu Chang, Jonathan Peter, Anil Pooran, Arne von Delft, Dalene von Delft, Neil Martinson, Marian Loveday, Salome Charalambous, Elizabeth Kachingwe, Waasila Jassat, Cheryl Cohen, Stefano Tempia, Kevin Fennelly, Madhukar Pai
Tuberculosis
Medicine
Pandemic
DOI: 10.1038/s41564-022-01130-y
CRISPRi chemical genetics and comparative genomics identify genes mediating drug potency in Mycobacterium tuberculosis
Shuqi Li, Nicholas C. Poulton, Jesseon S. Chang, Zachary A. Azadian, Michael A. DeJesus, Nadine Ruecker, Matthew D. Zimmerman, Kathryn A. Eckartt, Barbara Bosch, Curtis A. Engelhart, Daniel F. Sullivan, Martin Gengenbacher, Véronique Dartois, Dirk Schnappinger, Jeremy M. Rock
Mycobacterium tuberculosis
Tuberculosis
Drug resistance
DOI: 10.1016/j.immuni.2022.04.004
Multimodal profiling of lung granulomas in macaques reveals cellular correlates of tuberculosis control
Hannah P Gideon, Travis K Hughes, Constantine N Tzouanas, Marc H Wadsworth, Ang Andy Tu, Todd M Gierahn, Joshua M Peters, Forrest F Hopkins, Jun-Rong Wei, Conner Kummerlowe, Nicole L Grant, Kievershen Nargan, Jia Yao Phuah, H Jacob Borish, Pauline Maiello, Alexander G White, Caylin G Winchell, Sarah K Nyquist, Sharie Keanne C Ganchua, Amy Myers, Kush V Patel, Cassaundra L Ameel, Catherine T Cochran, Samira Ibrahim, Jaime A Tomko, Lonnie James Frye, Jacob M Rosenberg, Angela Shih, Michael Chao, Edwin Klein, Charles A Scanga, Jose Ordovas-Montanes, Bonnie Berger, Joshua T Mattila, Rajhmun Madansein, J Christopher Love, Philana Ling Lin, Alasdair Leslie, Samuel M Behar, Bryan Bryson, JoAnne L Flynn, Sarah M Fortune, Alex K Shalek
Biology
Granuloma
Immune system
DOI: 10.1016/s1473-3099(21)00470-9
Assessment of epidemiological and genetic characteristics and clinical outcomes of resistance to bedaquiline in patients treated for rifampicin-resistant tuberculosis: a cross-sectional and longitudinal study
Nazir Ahmed Ismail, Shaheed V. Omar, Harry Moultrie, Zaheda Bhyat., Francesca Conradie, Martin Enwerem, Hannetjie Ferreira, Jennifer Hughes, Lavania Joseph, Yulene Kock, Vancy Letsaolo, Gary Maartens, Graeme Meintjes, Dumisani Ngcamu, Nana Okozi, Xavier Padanilam, Anja Reuter, Rodolf Romero, Simon Schaaf, Julian Te Riele, Ebrahim Variava, Minty van der Meulen, Farzana Ismail, Norbert Ndjeka
Bedaquiline
Medicine
Tuberculosis
DOI: 10.1056/nejmoa2119430
Bedaquiline–Pretomanid–Linezolid Regimens for Drug-Resistant Tuberculosis
Francesca Conradie, Tatevik R. Bagdasaryan, Sergey Borisov, Pauline Howell, Lali Mikiashvili, Nosipho Ngubane, Anastasia Samoilova, Sergey Skornykova, Elena Tudor, Ebrahim Variava, Petr Yablonskiy, Daniel Everitt, Genevieve H. Wills, Eugene Sun, Morounfolu Olugbosi, Erica Egizi, Mengchun Li, Alda Holsta, Juliano Timm, Anna Bateson, Angela M. Crook, Stella M. Fabiane, Robert Hunt, Timothy D. McHugh, Conor D. Tweed, Salah Foraida, Carl M. Mendel, Melvin Spigelman
Bedaquiline
Medicine
Linezolid
DOI: 10.5217/ir.2020.00155
Use of thiopurines in inflammatory bowel disease: an update
Arshdeep Singh, Ramit Mahajan, Saurabh Kedia, Amit Dutta, Abhinav Anand, Charles N. Bernstein, Devendra Desai, C. Ganesh Pai, Govind K. Makharia, Harsh Vardhan Tevethia, Joyce Wing Yan Mak, Kirandeep Kaur, Kiran Peddi, Mukesh Ranjan, Perttu Arkkila, Rakesh Kochhar, Rupa Banerjee, Saroj K. Sinha, Siew C. Ng, Stephen B. Hanauer, Suhang Verma, Usha Dutta, Vandana Midha, Varun Mehta, Vineet Ahuja, Ajit Sood
Medicine
Thiopurine methyltransferase
Inflammatory bowel disease
DOI: 10.1016/s1473-3099(21)00452-7
Detection of isoniazid, fluoroquinolone, ethionamide, amikacin, kanamycin, and capreomycin resistance by the Xpert MTB/XDR assay: a cross-sectional multicentre diagnostic accuracy study
Adam Penn-Nicholson, Sophia B. Georghiou, Nelly Ciobanu, Mubin Kazi, Manpreet Bhalla, Anura David, Francesca Conradie, Morten Ruhwald, Valeriu Crudu, Camilla Rodrigues, Vithal Prasad Myneedu, Lesley Scott, Claudia M. Denkinger, Samuel G Schumacher
Capreomycin
Ethionamide
Medicine
DOI: 10.7554/elife.74419
Host-pathogen genetic interactions underlie tuberculosis susceptibility in genetically diverse mice
Clare M. Smith, Richard Baker, Megan K. Proulx, Bibhuti Mishra, Jarukit E. Long, Sae Woong Park, Ha-Na Lee, Michael C. Kiritsy, Michelle M. Bellerose, Andrew J. Olive, Kenan C. Murphy, K. G. Papavinasasundaram, Frederick J. Boehm, Charlotte J. Reames, Rachel Meade, Brea K. Hampton, Colton Linnertz, Ginger D. Shaw, Pablo Hock, Timothy A. Bell, Sabine Ehrt, Dirk Schnappinger, Fernando Pardo-Manuel de Villena, Martin T. Ferris, Thomas R. Ioerger, Christopher M. Sassetti
Biology
Genetics
Virulence