David J. Lipman

National Center for Biotechnology Information

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DOI: 10.1002/bip.360260106
·
1987
Cited 9 times
Local sequence patterns of hydrophobicity and solvent accessibility in soluble globular proteins
David J. Lipman
DOI: 10.1002/prot.340090304
·
1991
Cited 971 times
A workbench for multiple alignment construction and analysis
David J. Lipman
DOI: 10.1007/bf02100090
·
1985
Cited 42 times
Interaction of silent and replacement changes in eukaryotic coding sequences
David J. Lipman
DOI: 10.1016/0022-2836(83)90063-3
·
1983
Cited 62 times
Contextual constraints on synonymous codon choice
David J. Lipman
DOI: 10.1016/0022-2836(89)90234-9
·
1989
Cited 163 times
Weights for data related by a tree
David J. Lipman
DOI: 10.1016/0888-7543(90)90583-g
·
1990
Cited 75 times
The National Center for Biotechnology Information
David J. Lipman
DOI: 10.1016/s0022-2836(05)80360-2
·
1990
Cited 71,750 times
Basic local alignment search tool
David J. Lipman
DOI: 10.1038/14230
·
1999
Supporting the gene expression effort
David J. Lipman
DOI: 10.1038/35071270
·
2001
Cited 10 times
PubMed Central decentralized
David J. Lipman
DOI: 10.1038/442981a
·
2006
Cited 111 times
A global initiative on sharing avian flu data
David J. Lipman
DOI: 10.1038/493026a
·
2013
NIH funding: Agency rebuts critique
David J. Lipman
DOI: 10.1038/nature04239
·
2005
Cited 432 times
Large-scale sequencing of human influenza reveals the dynamic nature of viral genome evolution
David J. Lipman
DOI: 10.1038/nature28043
·
2001
GenBank - a model community resource?
David J. Lipman
DOI: 10.1038/nature28053
·
2001
PubMed Central decides to decentralize
David J. Lipman
DOI: 10.1038/nbt.4267
·
2018
Cited 35 times
How user intelligence is improving PubMed
David J. Lipman
DOI: 10.1073/pnas.0901808106
·
2009
Cited 210 times
The universal distribution of evolutionary rates of genes and distinct characteristics of eukaryotic genes of different apparent ages
David J. Lipman
DOI: 10.1073/pnas.200346997
·
2000
Cited 264 times
Lineage-specific loss and divergence of functionally linked genes in eukaryotes
David J. Lipman
DOI: 10.1073/pnas.80.3.726
·
1983
Cited 1,368 times
Rapid similarity searches of nucleic acid and protein data banks.
David J. Lipman
DOI: 10.1073/pnas.85.8.2444
·
1988
Cited 10,328 times
Improved tools for biological sequence comparison.
David J. Lipman
DOI: 10.1073/pnas.86.12.4412
·
1989
Cited 446 times
A tool for multiple sequence alignment.
David J. Lipman
DOI: 10.1073/pnas.87.14.5509
·
1990
Cited 422 times
Protein database searches for multiple alignments.
David J. Lipman
DOI: 10.1093/gbe/evq010
·
2010
Cited 23 times
Relative Contributions of Intrinsic Structural–Functional Constraints and Translation Rate to the Evolution of Protein-Coding Genes
David J. Lipman
DOI: 10.1093/gbe/evt024
·
2013
Cited 5 times
Why Does a Protein’s Evolutionary Rate Vary over Time?
David J. Lipman
DOI: 10.1093/nar/10.17.5375
·
1982
Hierarchical analysis of influenza A hemagglutinin gene sequences
David J. Lipman
DOI: 10.1093/nar/10.8.2723
·
1982
Cited 16 times
Comparative analysis of nucleic acid sequences by their general constraints
David J. Lipman
DOI: 10.1093/nar/12.1part1.215
·
1984
Cited 80 times
On the statistical significance of nucleic add similarities
David J. Lipman
DOI: 10.1093/nar/25.17.3389
·
1997
Cited 64,067 times
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
David J. Lipman
DOI: 10.1093/nar/25.18.3580
·
1997
Cited 82 times
Making (anti)sense of non-coding sequence conservation
David J. Lipman
DOI: 10.1093/nar/25.9.1665
·
1997
Cited 230 times
Extracting protein alignment models from the sequence database
David J. Lipman
DOI: 10.1093/nar/26.17.3986
·
1998
Cited 301 times
Protein sequence similarity searches using patterns as seeds
David J. Lipman
DOI: 10.1093/nar/gkg751
·
2003
Cited 19 times
Patterns in interspecies similarity correlate with nucleotide composition in mammalian 3'UTRs
David J. Lipman
DOI: 10.1093/nar/gkh313
·
2004
Cited 90 times
Comparative analysis of orthologous eukaryotic mRNAs: potential hidden functional signals
David J. Lipman
DOI: 10.1093/nar/gkn723
·
2009
Cited 537 times
GenBank
David J. Lipman
DOI: 10.1093/nar/gkp712
·
2009
Cited 34 times
Selection for minimization of translational frameshifting errors as a factor in the evolution of codon usage
David J. Lipman
DOI: 10.1098/rspb.1991.0081
·
1991
Cited 136 times
Modelling neutral and selective evolution of protein folding
David J. Lipman
DOI: 10.1101/gr.080531.108
·
2009
Cited 509 times
The consensus coding sequence (CCDS) project: Identifying a common protein-coding gene set for the human and mouse genomes
David J. Lipman
DOI: 10.1101/gr.2596504
·
2004
Cited 468 times
The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)
David J. Lipman
DOI: 10.1101/gr.278202
·
2002
Cited 590 times
CDART: Protein Homology by Domain Architecture
David J. Lipman
DOI: 10.1109/bibmw.2011.6112529
·
2011
An approach to phylogenomic analysis of bacterial pathogens
David J. Lipman
DOI: 10.11234/gi1990.6.170
·
1995
From Genotype to Phenotype: Navigating Nature's Information Landscape at NCBI
David J. Lipman
DOI: 10.1126/science.1131729
·
2006
Cited 27 times
Comment on "Large-Scale Sequence Analysis of Avian Influenza Isolates"
David J. Lipman
DOI: 10.1126/science.278.5338.631
·
1997
Cited 3,161 times
A Genomic Perspective on Protein Families
David J. Lipman
DOI: 10.1126/science.2983426
·
1985
Cited 3,838 times
Rapid and Sensitive Protein Similarity Searches
David J. Lipman
DOI: 10.1126/science.8456298
·
1993
Cited 163 times
Ancient Conserved Regions in New Gene Sequences and the Protein Databases
David J. Lipman
DOI: 10.1128/jvi.02005-07
·
2008
Cited 871 times
The Influenza Virus Resource at the National Center for Biotechnology Information
David J. Lipman
DOI: 10.1128/jvi.02257-12
·
2013
Cited 59 times
Sequential Seasonal H1N1 Influenza Virus Infections Protect Ferrets against Novel 2009 H1N1 Influenza Virus
David J. Lipman
DOI: 10.1137/0144038
·
1984
Cited 83 times
The Context Dependent Comparison of Biological Sequences
David J. Lipman
DOI: 10.1137/0148063
·
1988
Cited 466 times
The Multiple Sequence Alignment Problem in Biology
David J. Lipman
DOI: 10.1137/0149012
·
1989
Cited 116 times
Trees, Stars, and Multiple Biological Sequence Alignment
David J. Lipman
DOI: 10.1186/1471-2148-2-20
·
2002
Cited 135 times
David J. Lipman
DOI: 10.1186/1471-2148-8-208
·
2008
Cited 3 times
Differences in evolutionary pressure acting within highly conserved ortholog groups
David J. Lipman
DOI: 10.1186/1745-6150-1-1
·
2006
Cited 70 times
David J. Lipman
DOI: 10.1186/1745-6150-1-34
·
2006
Cited 173 times
Long intervals of stasis punctuated by bursts of positive selection in the seasonal evolution of influenza A virus
David J. Lipman
DOI: 10.1186/1745-6150-3-20
·
2008
Cited 258 times
Splign: algorithms for computing spliced alignments with identification of paralogs
David J. Lipman
DOI: 10.1186/1745-6150-7-12
·
2012
Cited 592 times
Domain enhanced lookup time accelerated BLAST
David J. Lipman
DOI: 10.1186/1745-6150-8-11
·
2013
Cited 6 times
Biology Direct:celebrating 7 years of open, published peer review
David J. Lipman
DOI: 10.1186/gb-2011-12-3-402
·
2011
Cited 24 times
Closure of the NCBI SRA and implications for the long-term future of genomics data storage
David J. Lipman
DOI: 10.1371/currents.rrn1001
·
2009
Cited 39 times
Evolutionary Dynamics of N-Glycosylation Sites of Influenza Virus Hemagglutinin
David J. Lipman
DOI: 10.1371/currents.rrn1200
·
2010
Cited 10 times
Projection of seasonal influenza severity from sequence and serological data
David J. Lipman
DOI: 10.1371/journal.pbio.0030300
·
2005
Cited 342 times
Whole-Genome Analysis of Human Influenza A Virus Reveals Multiple Persistent Lineages and Reassortment among Recent H3N2 Viruses
David J. Lipman
DOI: 10.1371/journal.pone.0039435
·
2012
Cited 11 times
Complex Patterns of Human Antisera Reactivity to Novel 2009 H1N1 and Historical H1N1 Influenza Strains
David J. Lipman
DOI: 10.1371/journal.ppat.0020125
·
2006
Cited 169 times
Stochastic Processes Are Key Determinants of Short-Term Evolution in Influenza A Virus
David J. Lipman
DOI: 10.1371/journal.ppat.0020138
·
2006
Correction: Stochastic Processes Are Key Determinants of Short-Term Evolution in Influenza A Virus
David J. Lipman
DOI: 10.1371/journal/ppat.0020138
·
2006
Erratum: Stochastic processes are key determinants of short-term evolution in influenza A virus (PLoS pathogens 2, 12 DOI: 10.1371/journal.ppat.0020125)
David J. Lipman
DOI: 10.7554/elife.28801
·
2017
Cited 53 times
Towards PubMed 2.0
David J. Lipman
MAG: 133251636
·
1997
A natural taxonomy of gene families from complete genomes.
David J. Lipman
MAG: 1829312150
·
2001
Cited 44 times
PubMed: bridging the information gap.
David J. Lipman
MAG: 2184127838
·
2008
GUEST COMMENTARY The Influenza Virus Resource at the National Center for Biotechnology Information
David J. Lipman